Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCAF13DDB1 and CUL4 associated factor 13. (399 aa)    
Predicted Functional Partners:
WDR46
WD repeat domain 46.
   
 0.999
NOC4L
Nucleolar complex associated 4 homolog.
   
 0.998
KRR1
KRR1 small subunit processome component homolog.
   
 0.997
NOP14
NOP14 nucleolar protein.
   
 0.997
UTP11
UTP11 small subunit processome component.
   
  0.997
WDR75
WD repeat domain 75.
   
 0.996
PDCD11
Programmed cell death 11.
   
 0.996
DDX52
DExD-box helicase 52.
   
 0.996
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.996
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
 0.996
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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