STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCOA1Nuclear receptor coactivator 1. (1320 aa)    
Predicted Functional Partners:
ESR2
Estrogen receptor 2.
    
 0.994
CREBBP
CREB binding protein.
   
 0.993
RXRA
Retinoid X receptor alpha.
   
 0.990
RXRG
Retinoid X receptor gamma.
   
 0.984
NCOA2
Nuclear receptor coactivator 2.
  
0.983
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.982
THRB
Thyroid hormone receptor beta.
    
 0.982
ENSCAPP00000002817
annotation not available
    
 0.980
ENSCAPP00000007887
annotation not available
    
 0.980
NR1I2
Nuclear receptor subfamily 1 group I member 2.
    
 0.975
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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