STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCA1LIQ motif containing with AAA domain 1 like. (777 aa)    
Predicted Functional Partners:
ENSCAPP00000007435
annotation not available
    
 0.835
ENSCAPP00000006743
annotation not available
   
 0.820
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.813
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 0.765
ENSCAPP00000016289
annotation not available
    
 0.765
NAPA
NSF attachment protein alpha.
    
 0.760
NAPB
NSF attachment protein beta.
    
 0.760
ENSCAPP00000000280
annotation not available
    
 0.755
CHMP1A
Charged multivesicular body protein 1A.
    
 0.754
TEP1
Telomerase associated protein 1.
   
 0.747
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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