STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RXRGRetinoid X receptor gamma. (444 aa)    
Predicted Functional Partners:
RXRA
Retinoid X receptor alpha.
   
 0.998
RARA
Retinoic acid receptor alpha.
   
 0.996
PPARA
Peroxisome proliferator activated receptor alpha.
   
 0.994
RARB
Retinoic acid receptor beta.
   
 0.993
NR1H2
Nuclear receptor subfamily 1 group H member 2.
   
 0.993
NR1H3
Nuclear receptor subfamily 1 group H member 3.
   
 0.993
RXRB
Retinoid X receptor beta.
   
 
  0.992
NCOA2
Nuclear receptor coactivator 2.
   
 0.991
RARG
Retinoic acid receptor gamma.
   
 0.991
MED1
Mediator complex subunit 1.
    
 0.990
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.