STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RXRGRetinoid X receptor gamma. (444 aa)    
Predicted Functional Partners:
PPARG
Peroxisome proliferator activated receptor gamma.
    
0.987
NCOA2
Nuclear receptor coactivator 2.
   
 0.986
NCOA1
Nuclear receptor coactivator 1.
   
 0.984
THRB
Thyroid hormone receptor beta.
    
0.972
ENSCAPP00000011708
annotation not available
    
 0.963
THRA
Thyroid hormone receptor alpha.
    
0.954
RARA
Retinoic acid receptor alpha.
   
0.954
PPARA
Peroxisome proliferator activated receptor alpha.
   
0.951
MED1
Mediator complex subunit 1.
    
 0.950
PPARD
Peroxisome proliferator activated receptor delta.
    
0.936
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.