| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACAP3 | APPL1 | ENSCAPP00000004884 | ENSCAPP00000014373 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | 0.763 |
| ACAP3 | APPL2 | ENSCAPP00000004884 | ENSCAPP00000012505 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2. | 0.763 |
| ACAP3 | ARFGAP1 | ENSCAPP00000004884 | ENSCAPP00000011015 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | ADP ribosylation factor GTPase activating protein 1. | 0.699 |
| ACAP3 | ARFGAP3 | ENSCAPP00000004884 | ENSCAPP00000011075 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | ADP ribosylation factor GTPase activating protein 3. | 0.693 |
| ACAP3 | ARL15 | ENSCAPP00000004884 | ENSCAPP00000012628 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | ADP ribosylation factor like GTPase 15. | 0.691 |
| ACAP3 | ENSCAPP00000017224 | ENSCAPP00000004884 | ENSCAPP00000017224 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | annotation not available | 0.629 |
| ACAP3 | RAB35 | ENSCAPP00000004884 | ENSCAPP00000003092 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | RAB35, member RAS oncogene family. | 0.824 |
| ACAP3 | SMAP1 | ENSCAPP00000004884 | ENSCAPP00000001059 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | Small ArfGAP 1. | 0.609 |
| ACAP3 | SMAP2 | ENSCAPP00000004884 | ENSCAPP00000012930 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | Small ArfGAP2. | 0.609 |
| ACAP3 | UBE2J2 | ENSCAPP00000004884 | ENSCAPP00000006106 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | Ubiquitin conjugating enzyme E2 J2. | 0.638 |
| APPL1 | ACAP3 | ENSCAPP00000014373 | ENSCAPP00000004884 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | 0.763 |
| APPL1 | APPL2 | ENSCAPP00000014373 | ENSCAPP00000012505 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2. | 0.991 |
| APPL1 | ARFGAP1 | ENSCAPP00000014373 | ENSCAPP00000011015 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | ADP ribosylation factor GTPase activating protein 1. | 0.615 |
| APPL1 | ARFGAP3 | ENSCAPP00000014373 | ENSCAPP00000011075 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | ADP ribosylation factor GTPase activating protein 3. | 0.477 |
| APPL1 | ARL15 | ENSCAPP00000014373 | ENSCAPP00000012628 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | ADP ribosylation factor like GTPase 15. | 0.846 |
| APPL1 | RAB35 | ENSCAPP00000014373 | ENSCAPP00000003092 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | RAB35, member RAS oncogene family. | 0.619 |
| APPL1 | SMAP1 | ENSCAPP00000014373 | ENSCAPP00000001059 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | Small ArfGAP 1. | 0.624 |
| APPL1 | SMAP2 | ENSCAPP00000014373 | ENSCAPP00000012930 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | Small ArfGAP2. | 0.624 |
| APPL2 | ACAP3 | ENSCAPP00000012505 | ENSCAPP00000004884 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2. | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | 0.763 |
| APPL2 | APPL1 | ENSCAPP00000012505 | ENSCAPP00000014373 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2. | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | 0.991 |