Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KERAKeratocan. (369 aa)    
Predicted Functional Partners:
ENSCAPP00000006041
annotation not available
    
   0.958
NUDT12
Nudix hydrolase 12.
   
  0.906
ENSCAPP00000006551
annotation not available
     
 0.854
ALDH3A1
Aldehyde dehydrogenase 3 family member A1.
     
 0.847
LRR1
Leucine rich repeat protein 1.
  
   
 0.809
B3GNT7
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7.
     
 0.740
CHST4
Carbohydrate sulfotransferase 4.
     
 0.738
CHST1
Carbohydrate sulfotransferase 1.
     
 0.732
OGN
Osteoglycin.
   
 
 0.728
ENSCAPP00000006020
annotation not available
    
 0.685
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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