STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004891annotation not available (394 aa)    
Predicted Functional Partners:
ENSCAPP00000001616
annotation not available
    
 
 0.792
PACSIN1
Protein kinase C and casein kinase substrate in neurons 1.
    
 
 0.782
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
    
 
 0.777
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.711
LMOD2
Leiomodin 2.
    
 
 0.637
ENSCAPP00000016364
annotation not available
    
  0.594
ENSCAPP00000005147
annotation not available
    
 0.585
HABP2
Hyaluronan binding protein 2.
    
 0.585
HGFAC
HGF activator.
    
 0.585
IHH
Indian hedgehog signaling molecule.
    
 0.563
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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