Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004891annotation not available (394 aa)    
Predicted Functional Partners:
PACSIN1
Protein kinase C and casein kinase substrate in neurons 1.
    
 
 0.969
ENSCAPP00000001616
annotation not available
    
 
 0.964
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
    
 
 0.961
TMOD3
Tropomodulin 3.
    
 
 0.903
MMAB
Metabolism of cobalamin associated B.
      
 0.746
TMOD2
Tropomodulin 2.
    
 
 0.731
ITPRID2
ITPR interacting domain containing 2.
      
 0.666
WAS
WASP actin nucleation promoting factor.
    
 0.654
ADAMTS7
ADAM metallopeptidase with thrombospondin type 1 motif 7.
      
 0.629
MORN5
MORN repeat containing 5.
    
 
 0.622
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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