Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNRC6CTrinucleotide repeat containing adaptor 6C. (1875 aa)    
Predicted Functional Partners:
DICER1
Dicer 1, ribonuclease III.
    
 0.824
DDX6
DEAD-box helicase 6.
   
 0.797
DHX9
DExH-box helicase 9.
    
  0.767
DCP2
Decapping mRNA 2.
     
 0.757
ENSCAPP00000015628
annotation not available
    
  0.751
SND1
Staphylococcal nuclease and tudor domain containing 1.
     
  0.750
LIMD1
LIM domains containing 1.
     
  0.750
AGO4
Argonaute RISC component 4.
    
 0.694
AGO1
Argonaute RISC component 1.
    
 0.694
AGO3
Argonaute RISC catalytic component 3.
    
 0.694
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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