close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNRC6CTrinucleotide repeat containing adaptor 6C. (1875 aa)    
Predicted Functional Partners:
DICER1
Dicer 1, ribonuclease III.
    
 0.874
DDX6
DEAD-box helicase 6.
   
 0.865
DHX9
DExH-box helicase 9.
    
 0.822
DCP2
Decapping mRNA 2.
     
 0.813
ENSCAPP00000015628
annotation not available
     
 0.805
CREBBP
CREB binding protein.
    
 0.698
EP300
E1A binding protein p300.
    
 0.698
AGO4
Argonaute RISC component 4.
    
 0.681
AGO1
Argonaute RISC component 1.
    
 0.681
AGO3
Argonaute RISC catalytic component 3.
    
 0.681
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.