STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4GALT7Beta-1,4-galactosyltransferase 7. (310 aa)    
Predicted Functional Partners:
XYLT2
Xylosyltransferase 2.
     
 0.904
XYLT1
Xylosyltransferase 1.
     
 0.877
B4GALNT1
beta-1,4-N-acetyl-galactosaminyltransferase 1.
    
 0.832
B4GALNT2
beta-1,4-N-acetyl-galactosaminyltransferase 2.
    
 0.832
SDC1
Syndecan 1.
     
 0.627
EGFLAM
EGF like, fibronectin type III and laminin G domains.
     
 0.609
GCNT1
Glucosaminyl (N-acetyl) transferase 1.
     
 0.596
GCNT7
Glucosaminyl (N-acetyl) transferase family member 7.
     
 0.595
GCNT4
Glucosaminyl (N-acetyl) transferase 4.
     
 0.595
GCNT2
Glucosaminyl (N-acetyl) transferase 2 (I blood group).
     
 0.595
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.