Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B4GALT7Beta-1,4-galactosyltransferase 7. (310 aa)    
Predicted Functional Partners:
XYLT1
Xylosyltransferase 1.
     
 0.968
XYLT2
Xylosyltransferase 2.
     
 0.967
B4GALNT1
beta-1,4-N-acetyl-galactosaminyltransferase 1.
    
 0.826
B4GALNT2
beta-1,4-N-acetyl-galactosaminyltransferase 2.
    
 0.826
B3GAT3
Beta-1,3-glucuronyltransferase 3.
   
  
 0.694
CSGALNACT1
Chondroitin sulfate N-acetylgalactosaminyltransferase 1.
      
 0.687
TMEM192
Transmembrane protein 192.
    
   0.684
GCNT1
Glucosaminyl (N-acetyl) transferase 1.
     
 0.646
LDLRAD3
Low density lipoprotein receptor class A domain containing 3.
    
 
 0.644
ENSCAPP00000011698
annotation not available
      
 0.640
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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