STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004898annotation not available (145 aa)    
Predicted Functional Partners:
TTC37
Tetratricopeptide repeat domain 37.
      
 0.692
ENSCAPP00000014166
annotation not available
      
 0.605
PERP
P53 apoptosis effector related to PMP22.
      
 0.601
ENSCAPP00000017798
annotation not available
      
 0.583
TRIM26
Tripartite motif containing 26.
      
 0.571
TRIM3
Tripartite motif containing 3.
      
 0.570
ENSCAPP00000011394
annotation not available
      
 0.530
ENSCAPP00000000013
annotation not available
     
  0.518
ENSCAPP00000000252
annotation not available
     
  0.518
CRYZ
Crystallin zeta.
     
  0.518
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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