Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DEUP1Deuterosome assembly protein 1. (481 aa)    
Predicted Functional Partners:
CEP57
Centrosomal protein 57.
   
 
 0.938
ENSCAPP00000014760
annotation not available
    
 
 0.885
ENSCAPP00000001485
annotation not available
    
 0.863
ENSCAPP00000002289
annotation not available
    
   0.818
HIP1
Huntingtin interacting protein 1.
    
   0.801
MAFG
MAF bZIP transcription factor G.
    
   0.800
ENSCAPP00000000974
annotation not available
    
 0.780
CEP152
Centrosomal protein 152.
   
 
 0.770
CCNO
Cyclin O.
    
 
 0.759
STIL
STIL centriolar assembly protein.
      
 0.702
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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