STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPIFCBPI fold containing family C. (508 aa)    
Predicted Functional Partners:
ENSCAPP00000014109
annotation not available
     
 0.640
ENSCAPP00000013134
annotation not available
   
 
 0.595
ENSCAPP00000015384
annotation not available
    
 0.568
CLU
Clusterin.
     
 0.548
ENSCAPP00000017899
annotation not available
     
 0.545
APOB
Apolipoprotein B.
     
 0.529
ENSCAPP00000009303
annotation not available
     
 0.528
LPL
Lipoprotein lipase.
     
 0.526
APOA1
Apolipoprotein A1.
     
 0.526
ENSCAPP00000006655
annotation not available
     
 0.524
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.