STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004908annotation not available (724 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen.
   
 0.984
FEN1
Flap structure-specific endonuclease 1.
  
 0.976
POLD1
DNA polymerase delta 1, catalytic subunit.
   
 0.938
RFC4
Replication factor C subunit 4.
   
 0.933
XRCC1
X-ray repair cross complementing 1.
   
 0.931
XRCC6
X-ray repair cross complementing 6.
   
 0.922
UHRF1
Ubiquitin like with PHD and ring finger domains 1.
   
 
 0.900
EXO1
Exonuclease 1.
  
 0.900
POLE
DNA polymerase epsilon, catalytic subunit.
   
 0.885
ENSCAPP00000002903
annotation not available
   
  
 0.874
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.