STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCNDecorin. (357 aa)    
Predicted Functional Partners:
ENSCAPP00000013524
annotation not available
    
 0.996
CCDC80
Coiled-coil domain containing 80.
   
 0.995
EGFR
Epidermal growth factor receptor.
    
 0.986
COL3A1
Collagen type III alpha 1 chain.
   
 0.968
COL1A2
Collagen type I alpha 2 chain.
   
 0.965
ENSCAPP00000013126
annotation not available
    
 0.962
LUM
Lumican.
  
  
0.960
ENSCAPP00000013134
annotation not available
    
 0.958
TGFB3
Transforming growth factor beta 3.
   
 0.954
ENSCAPP00000011600
annotation not available
   
 0.952
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.