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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARK4Microtubule affinity regulating kinase 4. (735 aa)    
Predicted Functional Partners:
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta.
    
 0.774
KSR1
Kinase suppressor of ras 1.
    
0.720
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta.
    
 0.703
YWHAG
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma.
    
 0.689
ENSCAPP00000009903
annotation not available
    
 0.664
ENSCAPP00000017737
annotation not available
    
 0.664
KSR2
Kinase suppressor of ras 2.
    
 
0.646
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 0.634
SHANK1
SH3 and multiple ankyrin repeat domains 1.
    
 0.634
SFN
Stratifin.
    
 0.633
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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