Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CASKIN1CASK interacting protein 1. (1340 aa)    
Predicted Functional Partners:
MPP1
Membrane palmitoylated protein 1.
    
 0.943
MPP2
Membrane palmitoylated protein 2.
    
 0.688
MPP6
Membrane palmitoylated protein 6.
    
 0.688
ATP5PD
ATP synthase peripheral stalk subunit d.
    
 
 0.662
ENSCAPP00000010226
annotation not available
   
 
 0.661
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.651
PTPN23
Protein tyrosine phosphatase non-receptor type 23.
    
 0.642
DLGAP3
DLG associated protein 3.
   
 0.634
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.576
DOC2A
Double C2 domain alpha.
   
  
 0.574
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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