STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASKIN1CASK interacting protein 1. (1340 aa)    
Predicted Functional Partners:
MPP1
Membrane palmitoylated protein 1.
    
 0.737
ACTBL2
Actin beta like 2.
    
 0.678
FREM1
FRAS1 related extracellular matrix 1.
   
  0.667
FREM3
FRAS1 related extracellular matrix 3.
   
  0.667
ABI2
Abl interactor 2.
    
 
 0.656
ENSCAPP00000016272
annotation not available
    
 0.617
ENSCAPP00000017181
annotation not available
   
 0.605
MPP2
Membrane palmitoylated protein 2.
    
 0.590
MPP6
Membrane palmitoylated protein 6.
    
 0.590
MARS1
methionyl-tRNA synthetase 1.
   
 0.572
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.