STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004927annotation not available (202 aa)    
Predicted Functional Partners:
ENSCAPP00000009620
annotation not available
    
 0.985
ENSCAPP00000010372
annotation not available
    
 0.985
ENSCAPP00000006417
annotation not available
    
 0.968
NLRP3
NLR family pyrin domain containing 3.
    
 0.940
ITCH
Itchy E3 ubiquitin protein ligase.
    
 
 0.936
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
   0.932
VAV2
Vav guanine nucleotide exchange factor 2.
    
   0.925
ENSCAPP00000013812
annotation not available
    
 0.895
RNH1
Ribonuclease/angiogenin inhibitor 1.
     
 0.849
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
    
   0.766
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.