STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M6PRMannose-6-phosphate receptor, cation dependent. (278 aa)    
Predicted Functional Partners:
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
    
 
 0.958
IGF2R
Insulin like growth factor 2 receptor.
     
 0.956
TOM1L2
Target of myb1 like 2 membrane trafficking protein.
    
 
 0.876
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 
 0.735
PLIN3
Perilipin 3.
   
 0.717
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.693
PLIN1
Perilipin 1.
   
 0.679
ENSCAPP00000014744
annotation not available
    
 0.673
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 
 0.657
VAMP3
Vesicle associated membrane protein 3.
   
 
 0.646
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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