STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GJB6Gap junction protein beta 6. (261 aa)    
Predicted Functional Partners:
GJA1
Gap junction protein alpha 1.
    
0.968
GJB2
Gap junction protein beta 2.
  
 
0.967
GJA5
Gap junction protein alpha 5.
    
0.949
GJA4
Gap junction protein alpha 4.
  
 
0.944
GJB3
Gap junction protein beta 3.
    
0.944
GJC1
Gap junction protein gamma 1.
     
0.939
GJD2
Gap junction protein delta 2.
     
0.930
ENSCAPP00000010784
annotation not available
     
 0.926
GJC3
Gap junction protein gamma 3.
     
0.922
GJB5
Gap junction protein beta 5.
  
  
 
0.920
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.