STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GJB6Gap junction protein beta 6. (261 aa)    
Predicted Functional Partners:
GJC1
Gap junction protein gamma 1.
     
 0.991
GJD2
Gap junction protein delta 2.
     
  0.991
GJB2
Gap junction protein beta 2.
   
 
 0.965
GJA1
Gap junction protein alpha 1.
    
 0.962
ENSCAPP00000010784
annotation not available
     
 0.960
GJB3
Gap junction protein beta 3.
    
  0.956
GJA4
Gap junction protein alpha 4.
    
 0.953
GJB5
Gap junction protein beta 5.
     
  0.947
GJC3
Gap junction protein gamma 3.
     
 0.947
GJA5
Gap junction protein alpha 5.
     
  0.947
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.