Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
QTRT2Queuine tRNA-ribosyltransferase accessory subunit 2. (319 aa)    
Predicted Functional Partners:
QTRT1
Queuine tRNA-ribosyltransferase catalytic subunit 1.
  
0.998
ELAC2
elaC ribonuclease Z 2.
     
 0.622
PTS
6-pyruvoyltetrahydropterin synthase.
   
 0.595
MTHFD2
annotation not available
  
 
  0.579
THUMPD3
THUMP domain containing 3.
      
 0.574
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
  
 0.557
CACTIN
Cactin, spliceosome C complex subunit.
      
 0.530
CNOT2
CCR4-NOT transcription complex subunit 2.
      
 0.525
AGA
Aspartylglucosaminidase.
    
   0.517
WDR43
WD repeat domain 43.
   
  
 0.512
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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