Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPHA1EPH receptor A1. (964 aa)    
Predicted Functional Partners:
EFNA5
Ephrin A5.
   
 0.996
EFNA2
Ephrin A2.
   
 0.993
EFNA4
Ephrin A4.
   
 0.983
ENSCAPP00000008657
annotation not available
    
 0.965
EFNB2
Ephrin B2.
   
 0.958
EFNB1
Ephrin B1.
   
 0.948
RASA1
RAS p21 protein activator 1.
   
 0.927
EFNB3
Ephrin B3.
   
 0.910
RPL13A
Ribosomal protein L13a.
   
 0.888
GRB2
Growth factor receptor bound protein 2.
   
 0.878
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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