STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004962annotation not available (196 aa)    
Predicted Functional Partners:
ENSCAPP00000013082
annotation not available
    
 0.727
ENSCAPP00000017006
annotation not available
    
 0.715
RUVBL1
RuvB like AAA ATPase 1.
    
 0.686
ENSCAPP00000009319
annotation not available
    
 0.686
RUVBL2
RuvB like AAA ATPase 2.
    
 0.675
ACTR8
Actin related protein 8.
    
 0.609
ACTL6A
Actin like 6A.
    
 0.516
KRTAP11-1
Keratin associated protein 11-1.
   
 0.502
ENSCAPP00000001855
annotation not available
    
   0.428
ENSCAPP00000006251
annotation not available
    
   0.428
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.