STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004962annotation not available (196 aa)    
Predicted Functional Partners:
ACTR8
Actin related protein 8.
   
 0.665
ENSCAPP00000013082
annotation not available
    
 0.638
RUVBL2
RuvB like AAA ATPase 2.
    
  0.634
ENSCAPP00000017006
annotation not available
    
 0.619
ACTL6A
Actin like 6A.
    
  0.514
RUVBL1
RuvB like AAA ATPase 1.
    
  0.483
ENSCAPP00000009319
annotation not available
    
  0.483
KRTAP11-1
Keratin associated protein 11-1.
   
 0.431
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.