Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC124Coiled-coil domain containing 124. (221 aa)    
Predicted Functional Partners:
ENSCAPP00000016629
annotation not available
    
 
 0.938
SERBP1
SERPINE1 mRNA binding protein 1.
   
 
 0.913
ABCE1
ATP binding cassette subfamily E member 1.
    
 
 0.849
ENSCAPP00000009223
annotation not available
   
 
 0.848
PRKRA
Protein activator of interferon induced protein kinase EIF2AK2.
    
 
 0.830
RPS5
Ribosomal protein S5.
   
 
 0.818
RPL8
Ribosomal protein L8.
   
 
 0.802
ENSCAPP00000018144
annotation not available
    
 
 0.802
RPL35
Ribosomal protein L35.
   
 
 0.799
RPL10A
Ribosomal protein L10a.
   
   0.792
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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