STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF130Ring finger protein 130. (281 aa)    
Predicted Functional Partners:
CGRRF1
Cell growth regulator with ring finger domain 1.
     
 0.702
RNF145
Ring finger protein 145.
    
 0.691
RNFT2
Ring finger protein, transmembrane 2.
      
 0.661
RNF144A
Ring finger protein 144A.
     
 0.656
ENSCAPP00000002181
annotation not available
      
 0.607
RNF144B
Ring finger protein 144B.
     
 0.583
RNF121
Ring finger protein 121.
      
 0.570
RNF170
Ring finger protein 170.
      
 0.570
ENSCAPP00000010706
annotation not available
      
 0.569
FAM131B
Family with sequence similarity 131 member B.
      
 0.567
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.