STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POU5F2POU domain class 5, transcription factor 2. (328 aa)    
Predicted Functional Partners:
SOX15
SRY-box transcription factor 15.
    
 0.895
SALL4
Spalt like transcription factor 4.
   
 0.882
CTNNB1
Catenin beta 1.
    
 0.764
ENSCAPP00000001526
annotation not available
   
 0.728
SALL3
Spalt like transcription factor 3.
   
 0.728
SOX10
SRY-box transcription factor 10.
    
 0.709
SOX8
SRY-box transcription factor 8.
    
 0.694
ENSCAPP00000013500
annotation not available
    
 0.690
SOX30
SRY-box transcription factor 30.
    
 0.682
JUP
Junction plakoglobin.
    
 0.656
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.