STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POU5F2POU domain class 5, transcription factor 2. (328 aa)    
Predicted Functional Partners:
SALL4
Spalt like transcription factor 4.
   
 0.983
SOX15
SRY-box transcription factor 15.
    
 0.961
CTNNB1
Catenin beta 1.
    
 0.923
ESRRB
Estrogen related receptor beta.
    
 0.918
ENSCAPP00000001526
annotation not available
   
 0.917
KDM1A
Lysine demethylase 1A.
    
 
 0.911
WDR5
WD repeat domain 5.
    
 
 0.911
ARID3B
AT-rich interaction domain 3B.
    
 
 0.904
MTA2
Metastasis associated 1 family member 2.
    
   0.903
GATAD2B
GATA zinc finger domain containing 2B.
    
 
 0.903
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.