STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF13PHD finger protein 13. (225 aa)    
Predicted Functional Partners:
MCRS1
Microspherule protein 1.
    
 0.901
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.879
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.834
TEX30
Testis expressed 30.
    
 0.834
ENSCAPP00000000021
annotation not available
    
 0.824
TBL1XR1
Transducin beta like 1 X-linked receptor 1.
    
 0.824
ENSCAPP00000015921
annotation not available
    
 0.801
BRMS1
BRMS1 transcriptional repressor and anoikis regulator.
    
 0.796
ENSCAPP00000018476
annotation not available
    
 0.796
SIN3B
SIN3 transcription regulator family member B.
    
 0.779
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.