Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NPTXRNeuronal pentraxin receptor. (321 aa)    
Predicted Functional Partners:
ENSCAPP00000010841
annotation not available
   
   0.849
ENSCAPP00000001276
annotation not available
    
 0.846
PCGF2
Polycomb group ring finger 2.
    
 0.846
ENSCAPP00000009463
annotation not available
    
 0.811
RING1
Ring finger protein 1.
    
 0.811
ENSCAPP00000018370
annotation not available
    
 0.811
PCGF1
Polycomb group ring finger 1.
    
 0.803
CBX7
Chromobox 7.
     
 0.795
BARD1
BRCA1 associated RING domain 1.
    
  0.787
CBX2
Chromobox 2.
     
 0.784
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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