STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004993annotation not available (350 aa)    
Predicted Functional Partners:
TOP3A
DNA topoisomerase III alpha.
    
 0.999
WRN
WRN RecQ like helicase.
    
 0.997
BLM
BLM RecQ like helicase.
   
 0.997
ENSCAPP00000011399
annotation not available
    
 0.993
RPA1
Replication protein A1.
    
 0.988
TOP3B
DNA topoisomerase III beta.
    
 0.984
RECQL4
RecQ like helicase 4.
    
 0.974
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 0.961
MUS81
MUS81 structure-specific endonuclease subunit.
    
 0.951
ENSCAPP00000009121
annotation not available
    
 
 0.943
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.