Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005006annotation not available (43 aa)    
Predicted Functional Partners:
SQSTM1
Sequestosome 1.
    
 0.998
TAX1BP1
Tax1 binding protein 1.
   
 0.997
ENSCAPP00000010142
annotation not available
   
 0.996
ENSCAPP00000017351
annotation not available
   
 0.996
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.995
ENSCAPP00000017532
annotation not available
    
 0.979
UBB
Ubiquitin B.
   
 0.978
ENSCAPP00000009958
annotation not available
   
 0.978
ENSCAPP00000000492
annotation not available
   
 0.977
ENSCAPP00000002923
annotation not available
   
 0.977
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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