STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A5Solute carrier family 27 member 5. (689 aa)    
Predicted Functional Partners:
ACOT8
acyl-CoA thioesterase 8.
     
 0.959
CYP27A1
Cytochrome P450 family 27 subfamily A member 1.
   
 
 0.948
AMACR
alpha-methylacyl-CoA racemase.
   
 
 0.931
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
   
 
 0.930
ENSCAPP00000004940
annotation not available
   
 
 0.884
ENSCAPP00000006987
annotation not available
   
 
 0.884
SLC27A4
Solute carrier family 27 member 4.
     
  0.841
SLC27A6
Solute carrier family 27 member 6.
     
  0.841
HAO1
Hydroxyacid oxidase 1.
   
 
 0.830
ENSCAPP00000003220
annotation not available
   
 
 0.796
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.