STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGLN2Transgelin 2. (197 aa)    
Predicted Functional Partners:
ENSCAPP00000000528
annotation not available
    
   0.896
TAGLN3
Transgelin 3.
   
   0.846
WDR90
WD repeat domain 90.
    
 
 0.823
AGR2
Anterior gradient 2, protein disulphide isomerase family member.
    
   0.785
ENSCAPP00000010204
annotation not available
   
 
 0.718
ANXA5
Annexin A5.
   
 0.707
VCL
Vinculin.
   
 
 0.696
LCP1
Lymphocyte cytosolic protein 1.
    
 
 0.685
PLS1
Plastin 1.
    
 
 0.685
GSTO2
Glutathione S-transferase omega 2.
    
 
 0.680
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.