STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC51ASolute carrier family 51 alpha subunit. (331 aa)    
Predicted Functional Partners:
SLC51B
Solute carrier family 51 beta subunit.
   
 
 0.912
CYP7A1
Cytochrome P450 family 7 subfamily A member 1.
      
 0.546
SLC10A2
Solute carrier family 10 member 2.
      
 0.545
ZDHHC19
Zinc finger DHHC-type containing 19.
      
 0.517
NR1H4
Nuclear receptor subfamily 1 group H member 4.
   
  
 0.443
ABCB11
ATP binding cassette subfamily B member 11.
   
  
 0.436
NR0B2
Nuclear receptor subfamily 0 group B member 2.
   
  
 0.435
PCYT1B
Phosphate cytidylyltransferase 1, choline, beta.
      
 0.433
SLC10A1
Solute carrier family 10 member 1.
      
 0.408
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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