Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005046annotation not available (115 aa)    
Predicted Functional Partners:
PRIMPOL
Primase and DNA directed polymerase.
      
 0.886
LAD1
Ladinin 1.
    
   0.822
CHCHD2
Coiled-coil-helix-coiled-coil-helix domain containing 2.
   
 
 0.803
SKP1
S-phase kinase associated protein 1.
    
 
 0.785
TFB1M
Transcription factor B1, mitochondrial.
  
  
 0.763
NOXO1
NADPH oxidase organizer 1.
      
 0.759
ENSCAPP00000003717
annotation not available
      
 0.661
NOX3
NADPH oxidase 3.
      
 0.645
ENSCAPP00000008459
annotation not available
      
 0.583
ENSCAPP00000005290
annotation not available
    
   0.582
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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