Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005048annotation not available (443 aa)    
Predicted Functional Partners:
USP7
Ubiquitin specific peptidase 7.
    
 
 0.842
H2AZ2
H2A.Z variant histone 2.
   
 
 0.799
DCK
Deoxycytidine kinase.
   
  
 0.715
ENSCAPP00000017718
annotation not available
   
 0.651
TMEM54
Transmembrane protein 54.
    
 
 0.613
ENSCAPP00000001550
annotation not available
    
 
 0.609
PEX2
Peroxisomal biogenesis factor 2.
      
 0.609
ENSCAPP00000007212
annotation not available
    
 
 0.597
ENSCAPP00000011126
annotation not available
      
 0.578
ENSCAPP00000018286
annotation not available
      
 0.576
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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