STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDAP2Ganglioside induced differentiation associated protein 2. (399 aa)    
Predicted Functional Partners:
VPS35
VPS35 retromer complex component.
    
   0.801
WDR3
WD repeat domain 3.
      
 0.693
ENSCAPP00000006906
annotation not available
      
 0.688
ENSCAPP00000011221
annotation not available
   
    0.676
IGSF3
Immunoglobulin superfamily member 3.
    
 
 0.668
MACROH2A2
macroH2A.2 histone.
    
 0.634
PTGFRN
Prostaglandin F2 receptor inhibitor.
      
 0.628
STRN3
Striatin 3.
   
 
 0.607
CD101
CD101 molecule.
    
 
 0.574
TMEM35A
Transmembrane protein 35A.
      
 0.571
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.