STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDAP2Ganglioside induced differentiation associated protein 2. (399 aa)    
Predicted Functional Partners:
ENSCAPP00000011221
annotation not available
   
    0.672
WDR3
WD repeat domain 3.
      
 0.563
IGSF3
Immunoglobulin superfamily member 3.
      
 0.559
PTGFRN
Prostaglandin F2 receptor inhibitor.
      
 0.555
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
      
 0.545
HDAC11
Histone deacetylase 11.
   
  0.494
ENSCAPP00000010095
annotation not available
  
 0.490
HDAC3
Histone deacetylase 3.
    
  0.446
HDAC1
Histone deacetylase 1.
    
  0.446
HDAC2
Histone deacetylase 2.
    
  0.446
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.