STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIPK4Receptor interacting serine/threonine kinase 4. (813 aa)    
Predicted Functional Partners:
TRAF7
TNF receptor associated factor 7.
    
 0.942
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
   
 0.937
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.931
PRKCD
Protein kinase C delta.
    
 0.892
ENSCAPP00000015096
annotation not available
    
 0.880
ENSCAPP00000000576
annotation not available
    
 0.879
ENSCAPP00000004781
annotation not available
    
 0.879
ENSCAPP00000005006
annotation not available
    
 0.874
TONSL
Tonsoku like, DNA repair protein.
    
 0.849
ENSCAPP00000013360
annotation not available
   
 0.848
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.