STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIPK4Receptor interacting serine/threonine kinase 4. (813 aa)    
Predicted Functional Partners:
ENSCAPP00000002614
annotation not available
    
 0.981
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
    
 0.981
KDM6B
Lysine demethylase 6B.
   
 0.970
WDR90
WD repeat domain 90.
    
 0.946
TRAF7
TNF receptor associated factor 7.
    
 0.931
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.927
ENSCAPP00000015096
annotation not available
    
 0.924
TAF6
TATA-box binding protein associated factor 6.
    
  0.919
TADA3
Transcriptional adaptor 3.
    
  0.917
TAF9
TATA-box binding protein associated factor 9.
     
 0.907
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.