Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMC3Structural maintenance of chromosomes 3. (1102 aa)    
Predicted Functional Partners:
STAG1
Stromal antigen 1.
   
 0.999
RAD21
RAD21 cohesin complex component.
   
 0.999
SMC1A
Structural maintenance of chromosomes 1A.
   
0.999
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.999
ENSCAPP00000010940
annotation not available
   
 0.999
REC8
REC8 meiotic recombination protein.
   
 0.999
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.998
ENSCAPP00000007093
annotation not available
   
 0.998
PDS5A
PDS5 cohesin associated factor A.
   
 0.998
PDS5B
PDS5 cohesin associated factor B.
   
 0.996
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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