STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE1CPhosphodiesterase 1C. (528 aa)    
Predicted Functional Partners:
PDE1A
Phosphodiesterase 1A.
  
 
 
0.946
PDE1B
Phosphodiesterase 1B.
  
 
 
0.943
ENSCAPP00000017763
annotation not available
    
 0.939
CALML3
Calmodulin like 3.
    
 0.936
AMPD2
Adenosine monophosphate deaminase 2.
     
 0.921
GNB3
G protein subunit beta 3.
     
 0.919
AMPD1
Adenosine monophosphate deaminase 1.
     
 0.919
APRT
Adenine phosphoribosyltransferase.
     
 0.915
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3.
     
 0.915
ADK
Adenosine kinase.
     
 0.913
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.