Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDE1CPhosphodiesterase 1C. (528 aa)    
Predicted Functional Partners:
PDE1A
Phosphodiesterase 1A.
    
  0.981
PDE1B
Phosphodiesterase 1B.
   
  0.978
GUCY1B1
Guanylate cyclase 1 soluble subunit beta 1.
     
 0.964
ADCY8
Adenylate cyclase 8.
     
 0.960
ENSCAPP00000017763
annotation not available
    
 0.954
GUCY2C
Guanylate cyclase 2C.
     
 0.948
ADCY3
Adenylate cyclase 3.
     
 0.945
AMPD3
Adenosine monophosphate deaminase 3.
     
 0.943
AMPD2
Adenosine monophosphate deaminase 2.
     
 0.939
ADCY5
Adenylate cyclase 5.
     
 0.935
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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