SLC25A33 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

SLC25A33

Solute carrier family 25 member 33. (313 aa)

Predicted Functional Partners:

ENSCAPP00000008195

0.935

EDF1

0.667

ENSCAPP00000010317

0.631

ENSCAPP00000009147

0.628

PUM2

0.628

FAH

0.617

FAHD2A

0.617

ENSCAPP00000018554

0.612

MTCH2

0.596

ENSCAPP00000009242

0.566

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDF1	ENSCAPP00000008195	ENSCAPP00000008541	ENSCAPP00000008195	Endothelial differentiation related factor 1.	annotation not available	0.667
EDF1	SLC25A33	ENSCAPP00000008541	ENSCAPP00000005076	Endothelial differentiation related factor 1.	Solute carrier family 25 member 33.	0.667
ENSCAPP00000008195	EDF1	ENSCAPP00000008195	ENSCAPP00000008541	annotation not available	Endothelial differentiation related factor 1.	0.667
ENSCAPP00000008195	ENSCAPP00000009147	ENSCAPP00000008195	ENSCAPP00000009147	annotation not available	annotation not available	0.628
ENSCAPP00000008195	ENSCAPP00000009242	ENSCAPP00000008195	ENSCAPP00000009242	annotation not available	annotation not available	0.566
ENSCAPP00000008195	ENSCAPP00000010317	ENSCAPP00000008195	ENSCAPP00000010317	annotation not available	annotation not available	0.631
ENSCAPP00000008195	FAH	ENSCAPP00000008195	ENSCAPP00000005095	annotation not available	Fumarylacetoacetate hydrolase.	0.617
ENSCAPP00000008195	FAHD2A	ENSCAPP00000008195	ENSCAPP00000006978	annotation not available	Fumarylacetoacetate hydrolase domain containing 2A.	0.617
ENSCAPP00000008195	PUM2	ENSCAPP00000008195	ENSCAPP00000017197	annotation not available	Pumilio RNA binding family member 2.	0.628
ENSCAPP00000008195	SLC25A33	ENSCAPP00000008195	ENSCAPP00000005076	annotation not available	Solute carrier family 25 member 33.	0.935
ENSCAPP00000009147	ENSCAPP00000008195	ENSCAPP00000009147	ENSCAPP00000008195	annotation not available	annotation not available	0.628
ENSCAPP00000009147	ENSCAPP00000010317	ENSCAPP00000009147	ENSCAPP00000010317	annotation not available	annotation not available	0.457
ENSCAPP00000009147	PUM2	ENSCAPP00000009147	ENSCAPP00000017197	annotation not available	Pumilio RNA binding family member 2.	0.993
ENSCAPP00000009147	SLC25A33	ENSCAPP00000009147	ENSCAPP00000005076	annotation not available	Solute carrier family 25 member 33.	0.628
ENSCAPP00000009242	ENSCAPP00000008195	ENSCAPP00000009242	ENSCAPP00000008195	annotation not available	annotation not available	0.566
ENSCAPP00000009242	SLC25A33	ENSCAPP00000009242	ENSCAPP00000005076	annotation not available	Solute carrier family 25 member 33.	0.566
ENSCAPP00000010317	ENSCAPP00000008195	ENSCAPP00000010317	ENSCAPP00000008195	annotation not available	annotation not available	0.631
ENSCAPP00000010317	ENSCAPP00000009147	ENSCAPP00000010317	ENSCAPP00000009147	annotation not available	annotation not available	0.457
ENSCAPP00000010317	PUM2	ENSCAPP00000010317	ENSCAPP00000017197	annotation not available	Pumilio RNA binding family member 2.	0.457
ENSCAPP00000010317	SLC25A33	ENSCAPP00000010317	ENSCAPP00000005076	annotation not available	Solute carrier family 25 member 33.	0.631