FAM222B protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

FAM222B

Family with sequence similarity 222 member B. (562 aa)

Predicted Functional Partners:

OR51D1

0.821

OR2K2

0.707

PDZD9

0.687

CEP152

0.686

SLC1A6

0.569

NHLRC3

0.567

NLK

0.518

ENSCAPP00000014301

0.449

ENSCAPP00000014011

0.448

ENSCAPP00000011251

0.438

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP152	FAM222B	ENSCAPP00000005378	ENSCAPP00000005084	Centrosomal protein 152.	Family with sequence similarity 222 member B.	0.686
CEP152	OR51D1	ENSCAPP00000005378	ENSCAPP00000003199	Centrosomal protein 152.	Olfactory receptor family 51 subfamily D member 1.	0.572
CEP152	PDZD9	ENSCAPP00000005378	ENSCAPP00000014757	Centrosomal protein 152.	PDZ domain containing 9.	0.633
ENSCAPP00000011251	FAM222B	ENSCAPP00000011251	ENSCAPP00000005084	annotation not available	Family with sequence similarity 222 member B.	0.438
ENSCAPP00000011251	OR2K2	ENSCAPP00000011251	ENSCAPP00000006876	annotation not available	Olfactory receptor family 2 subfamily K member 2.	0.659
ENSCAPP00000011251	OR51D1	ENSCAPP00000011251	ENSCAPP00000003199	annotation not available	Olfactory receptor family 51 subfamily D member 1.	0.754
ENSCAPP00000011251	PDZD9	ENSCAPP00000011251	ENSCAPP00000014757	annotation not available	PDZ domain containing 9.	0.633
ENSCAPP00000014011	FAM222B	ENSCAPP00000014011	ENSCAPP00000005084	annotation not available	Family with sequence similarity 222 member B.	0.448
ENSCAPP00000014301	FAM222B	ENSCAPP00000014301	ENSCAPP00000005084	annotation not available	Family with sequence similarity 222 member B.	0.449
FAM222B	CEP152	ENSCAPP00000005084	ENSCAPP00000005378	Family with sequence similarity 222 member B.	Centrosomal protein 152.	0.686
FAM222B	ENSCAPP00000011251	ENSCAPP00000005084	ENSCAPP00000011251	Family with sequence similarity 222 member B.	annotation not available	0.438
FAM222B	ENSCAPP00000014011	ENSCAPP00000005084	ENSCAPP00000014011	Family with sequence similarity 222 member B.	annotation not available	0.448
FAM222B	ENSCAPP00000014301	ENSCAPP00000005084	ENSCAPP00000014301	Family with sequence similarity 222 member B.	annotation not available	0.449
FAM222B	NHLRC3	ENSCAPP00000005084	ENSCAPP00000001931	Family with sequence similarity 222 member B.	NHL repeat containing 3.	0.567
FAM222B	NLK	ENSCAPP00000005084	ENSCAPP00000007135	Family with sequence similarity 222 member B.	Nemo like kinase.	0.518
FAM222B	OR2K2	ENSCAPP00000005084	ENSCAPP00000006876	Family with sequence similarity 222 member B.	Olfactory receptor family 2 subfamily K member 2.	0.707
FAM222B	OR51D1	ENSCAPP00000005084	ENSCAPP00000003199	Family with sequence similarity 222 member B.	Olfactory receptor family 51 subfamily D member 1.	0.821
FAM222B	PDZD9	ENSCAPP00000005084	ENSCAPP00000014757	Family with sequence similarity 222 member B.	PDZ domain containing 9.	0.687
FAM222B	SLC1A6	ENSCAPP00000005084	ENSCAPP00000016671	Family with sequence similarity 222 member B.	Solute carrier family 1 member 6.	0.569
NHLRC3	FAM222B	ENSCAPP00000001931	ENSCAPP00000005084	NHL repeat containing 3.	Family with sequence similarity 222 member B.	0.567