Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NFYANuclear transcription factor Y subunit alpha. (347 aa)    
Predicted Functional Partners:
ENSCAPP00000002391
annotation not available
    
 0.999
NFYB
Nuclear transcription factor Y subunit beta.
   
 0.999
ENSCAPP00000015240
annotation not available
    
 0.970
EP300
E1A binding protein p300.
    
 0.969
TP53
Tumor protein p53.
    
 
 0.964
TBP
TATA-box binding protein.
    
 0.958
ENSCAPP00000015721
annotation not available
    
 0.955
CHRAC1
Chromatin accessibility complex subunit 1.
    
 0.947
ENSCAPP00000011593
annotation not available
    
 0.947
CIITA
Class II major histocompatibility complex transactivator.
     
 0.945
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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