STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAHFumarylacetoacetate hydrolase. (400 aa)    
Predicted Functional Partners:
FAHD2A
Fumarylacetoacetate hydrolase domain containing 2A.
     
 0.909
FH
Fumarate hydratase.
  
 0.901
ENSCAPP00000000571
annotation not available
  
 
 0.891
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
  
 
  0.866
KMO
Kynurenine 3-monooxygenase.
  
 
 0.824
HPD
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.791
VARS1
valyl-tRNA synthetase 1.
  
 
 0.755
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
    
 0.746
HMGCL
3-hydroxy-3-methylglutaryl-CoA lyase.
    
 0.746
GRHPR
Glyoxylate and hydroxypyruvate reductase.
  
  0.745
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.