STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPCS2Signal peptidase complex subunit 2. (123 aa)    
Predicted Functional Partners:
SPCS3
Signal peptidase complex subunit 3.
   
 0.999
SEC11C
SEC11 homolog C, signal peptidase complex subunit.
   
 0.997
ENSCAPP00000018588
annotation not available
   
 0.996
IMMP2L
Inner mitochondrial membrane peptidase subunit 2.
   
 0.977
IMMP1L
Inner mitochondrial membrane peptidase subunit 1.
   
 0.977
ALPL
Alkaline phosphatase, biomineralization associated.
   
   0.959
DNASE1L1
Deoxyribonuclease 1 like 1.
    
 
 0.954
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
 0.953
SEC63
SEC63 homolog, protein translocation regulator.
   
 
 0.950
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
 
 0.941
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.