Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DEFB110Defensin beta 110. (69 aa)    
Predicted Functional Partners:
DEFB113
Defensin beta 113.
   
 
 0.849
DEFB124
Defensin beta 124.
     
 0.794
ENSCAPP00000007533
annotation not available
   
 
 0.693
ENSCAPP00000006112
annotation not available
     
 0.682
DEFB123
Defensin beta 123.
     
 0.682
ENSCAPP00000002972
annotation not available
     
 0.488
RNASE10
Ribonuclease A family member 10 (inactive).
      
 0.449
LCN8
Lipocalin 8.
      
 0.436
LCN10
Lipocalin 10.
      
 0.434
ENSCAPP00000017367
annotation not available
  
    0.411
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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