Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TUBB4ATubulin beta 4A class IVa. (408 aa)    
Predicted Functional Partners:
TUBA8
Tubulin alpha 8.
   
 0.904
ENSCAPP00000010449
annotation not available
    
 0.895
ENSCAPP00000012429
annotation not available
    
 0.895
KIF5B
Kinesin family member 5B.
    
 0.880
KIF5A
Kinesin family member 5A.
    
 0.880
DYNC1H1
Dynein cytoplasmic 1 heavy chain 1.
   
 0.869
ENSCAPP00000001646
annotation not available
    
  0.852
DYNLT1
Dynein light chain Tctex-type 1.
    
  0.852
TUBB6
Tubulin beta 6 class V.
   
  0.839
ENSCAPP00000009010
annotation not available
   
 0.837
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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