STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP1GTP binding protein 1. (644 aa)    
Predicted Functional Partners:
DIS3L
DIS3 like exosome 3'-5' exoribonuclease.
    
 0.760
EXOSC2
Exosome component 2.
     
 0.755
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease.
    
 0.706
EXOSC4
Exosome component 4.
     
 0.652
EXOSC10
Exosome component 10.
     
 0.650
EXOSC9
Exosome component 9.
     
 0.637
EXOSC5
Exosome component 5.
     
 0.629
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
    
 0.609
NPC1
NPC intracellular cholesterol transporter 1.
   
  
 0.576
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
    
 
 0.568
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.