NFU1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NFU1

NFU1 iron-sulfur cluster scaffold. (236 aa)

Predicted Functional Partners:

ENSCAPP00000008637

0.975

SCLY

0.972

SDHB

0.944

ENSCAPP00000013887

0.896

ISCU

0.871

ENSCAPP00000006226

0.869

ENSCAPP00000002569

0.866

ENSCAPP00000009625

0.866

ACO2

0.742

FXN

0.724

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACO2	ENSCAPP00000002569	ENSCAPP00000017618	ENSCAPP00000002569	Aconitase 2.	annotation not available	0.471
ACO2	ENSCAPP00000006226	ENSCAPP00000017618	ENSCAPP00000006226	Aconitase 2.	annotation not available	0.603
ACO2	ENSCAPP00000008637	ENSCAPP00000017618	ENSCAPP00000008637	Aconitase 2.	annotation not available	0.570
ACO2	ENSCAPP00000009625	ENSCAPP00000017618	ENSCAPP00000009625	Aconitase 2.	annotation not available	0.471
ACO2	ENSCAPP00000013887	ENSCAPP00000017618	ENSCAPP00000013887	Aconitase 2.	annotation not available	0.795
ACO2	FXN	ENSCAPP00000017618	ENSCAPP00000003299	Aconitase 2.	Frataxin.	0.674
ACO2	ISCU	ENSCAPP00000017618	ENSCAPP00000013312	Aconitase 2.	Iron-sulfur cluster assembly enzyme.	0.574
ACO2	NFU1	ENSCAPP00000017618	ENSCAPP00000005112	Aconitase 2.	NFU1 iron-sulfur cluster scaffold.	0.742
ACO2	SCLY	ENSCAPP00000017618	ENSCAPP00000002035	Aconitase 2.	Selenocysteine lyase.	0.516
ACO2	SDHB	ENSCAPP00000017618	ENSCAPP00000014177	Aconitase 2.	Succinate dehydrogenase complex iron sulfur subunit B.	0.930
ENSCAPP00000002569	ACO2	ENSCAPP00000002569	ENSCAPP00000017618	annotation not available	Aconitase 2.	0.471
ENSCAPP00000002569	ENSCAPP00000008637	ENSCAPP00000002569	ENSCAPP00000008637	annotation not available	annotation not available	0.901
ENSCAPP00000002569	ENSCAPP00000013887	ENSCAPP00000002569	ENSCAPP00000013887	annotation not available	annotation not available	0.596
ENSCAPP00000002569	FXN	ENSCAPP00000002569	ENSCAPP00000003299	annotation not available	Frataxin.	0.578
ENSCAPP00000002569	ISCU	ENSCAPP00000002569	ENSCAPP00000013312	annotation not available	Iron-sulfur cluster assembly enzyme.	0.937
ENSCAPP00000002569	NFU1	ENSCAPP00000002569	ENSCAPP00000005112	annotation not available	NFU1 iron-sulfur cluster scaffold.	0.866
ENSCAPP00000002569	SCLY	ENSCAPP00000002569	ENSCAPP00000002035	annotation not available	Selenocysteine lyase.	0.862
ENSCAPP00000002569	SDHB	ENSCAPP00000002569	ENSCAPP00000014177	annotation not available	Succinate dehydrogenase complex iron sulfur subunit B.	0.470
ENSCAPP00000006226	ACO2	ENSCAPP00000006226	ENSCAPP00000017618	annotation not available	Aconitase 2.	0.603
ENSCAPP00000006226	ENSCAPP00000013887	ENSCAPP00000006226	ENSCAPP00000013887	annotation not available	annotation not available	0.964