STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF1ADEukaryotic translation initiation factor 1A domain containing. (157 aa)    
Predicted Functional Partners:
RIOK1
RIO kinase 1.
    
 
 0.917
LRRC47
Leucine rich repeat containing 47.
   
 
 0.904
RPS18
Ribosomal protein S18.
    
   0.894
CTC1
CST telomere replication complex component 1.
    
   0.824
STAT1
Signal transducer and activator of transcription 1.
    
 
 0.821
RPS9
Ribosomal protein S9.
   
 
 0.819
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 
 0.810
RPS5
Ribosomal protein S5.
   
   0.795
ENSCAPP00000015046
annotation not available
   
   0.785
ENSCAPP00000013842
annotation not available
    
 
 0.778
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.