STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF1ADEukaryotic translation initiation factor 1A domain containing. (157 aa)    
Predicted Functional Partners:
ENSCAPP00000000576
annotation not available
   
   0.988
ENSCAPP00000004781
annotation not available
   
   0.988
RIOK1
RIO kinase 1.
   
 
 0.934
LRRC47
Leucine rich repeat containing 47.
   
 
 0.847
RPS18
Ribosomal protein S18.
    
   0.843
ENSCAPP00000011920
annotation not available
    
   0.759
RPS15
Ribosomal protein S15.
    
   0.759
ENSCAPP00000006028
annotation not available
    
   0.748
RACK1
Receptor for activated C kinase 1.
    
   0.748
RIOK3
RIO kinase 3.
   
 
 0.741
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.