ENSCAPP00000005118 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCAPP00000005118

annotation not available (169 aa)

Predicted Functional Partners:

HDAC1

0.963

ATP5F1A

0.948

ATP5F1D

0.948

ENSCAPP00000007856

0.948

ATP5F1C

0.948

ENSCAPP00000015921

0.922

ASH2L

0.917

RB1

0.912

HDAC2

0.907

CBX4

0.863

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASH2L	ENSCAPP00000005118	ENSCAPP00000005931	ENSCAPP00000005118	ASH2 like, histone lysine methyltransferase complex subunit.	annotation not available	0.917
ASH2L	ENSCAPP00000015921	ENSCAPP00000005931	ENSCAPP00000015921	ASH2 like, histone lysine methyltransferase complex subunit.	annotation not available	0.999
ASH2L	HDAC1	ENSCAPP00000005931	ENSCAPP00000015327	ASH2 like, histone lysine methyltransferase complex subunit.	Histone deacetylase 1.	0.515
ASH2L	HDAC2	ENSCAPP00000005931	ENSCAPP00000016491	ASH2 like, histone lysine methyltransferase complex subunit.	Histone deacetylase 2.	0.441
ATP5F1A	ATP5F1C	ENSCAPP00000005268	ENSCAPP00000008421	ATP synthase F1 subunit alpha.	ATP synthase F1 subunit gamma.	0.999
ATP5F1A	ATP5F1D	ENSCAPP00000005268	ENSCAPP00000007684	ATP synthase F1 subunit alpha.	ATP synthase F1 subunit delta.	0.999
ATP5F1A	ENSCAPP00000005118	ENSCAPP00000005268	ENSCAPP00000005118	ATP synthase F1 subunit alpha.	annotation not available	0.948
ATP5F1A	ENSCAPP00000007856	ENSCAPP00000005268	ENSCAPP00000007856	ATP synthase F1 subunit alpha.	annotation not available	0.999
ATP5F1C	ATP5F1A	ENSCAPP00000008421	ENSCAPP00000005268	ATP synthase F1 subunit gamma.	ATP synthase F1 subunit alpha.	0.999
ATP5F1C	ATP5F1D	ENSCAPP00000008421	ENSCAPP00000007684	ATP synthase F1 subunit gamma.	ATP synthase F1 subunit delta.	0.999
ATP5F1C	ENSCAPP00000005118	ENSCAPP00000008421	ENSCAPP00000005118	ATP synthase F1 subunit gamma.	annotation not available	0.948
ATP5F1C	ENSCAPP00000007856	ENSCAPP00000008421	ENSCAPP00000007856	ATP synthase F1 subunit gamma.	annotation not available	0.999
ATP5F1D	ATP5F1A	ENSCAPP00000007684	ENSCAPP00000005268	ATP synthase F1 subunit delta.	ATP synthase F1 subunit alpha.	0.999
ATP5F1D	ATP5F1C	ENSCAPP00000007684	ENSCAPP00000008421	ATP synthase F1 subunit delta.	ATP synthase F1 subunit gamma.	0.999
ATP5F1D	ENSCAPP00000005118	ENSCAPP00000007684	ENSCAPP00000005118	ATP synthase F1 subunit delta.	annotation not available	0.948
ATP5F1D	ENSCAPP00000007856	ENSCAPP00000007684	ENSCAPP00000007856	ATP synthase F1 subunit delta.	annotation not available	0.999
CBX4	ENSCAPP00000005118	ENSCAPP00000007761	ENSCAPP00000005118	Chromobox 4.	annotation not available	0.863
CBX4	HDAC1	ENSCAPP00000007761	ENSCAPP00000015327	Chromobox 4.	Histone deacetylase 1.	0.854
CBX4	HDAC2	ENSCAPP00000007761	ENSCAPP00000016491	Chromobox 4.	Histone deacetylase 2.	0.936
CBX4	RB1	ENSCAPP00000007761	ENSCAPP00000014424	Chromobox 4.	RB transcriptional corepressor 1.	0.785