STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OATOrnithine aminotransferase. (439 aa)    
Predicted Functional Partners:
ENSCAPP00000002101
annotation not available
  
 
 0.993
ARG1
Arginase 1.
 
 0.988
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
   
 0.986
ASS1
Argininosuccinate synthase 1.
  
 0.986
ARG2
Arginase 2.
  
 0.982
AGMAT
Agmatinase.
  
 0.953
ENSCAPP00000004078
annotation not available
  
 
 0.941
ALDH5A1
Aldehyde dehydrogenase 5 family member A1.
  
 0.931
ALDH4A1
Aldehyde dehydrogenase 4 family member A1.
  
 0.930
THNSL2
Threonine synthase like 2.
  
 
 0.924
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.