Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OATOrnithine aminotransferase. (439 aa)    
Predicted Functional Partners:
ARG2
Arginase 2.
  
 0.997
ARG1
Arginase 1.
 
 0.997
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
   
 0.995
ENSCAPP00000002101
annotation not available
  
 
 0.986
ASS1
Argininosuccinate synthase 1.
  
 0.973
ALDH4A1
Aldehyde dehydrogenase 4 family member A1.
  
 0.966
ODC1
Ornithine decarboxylase 1.
    
 0.965
AGMAT
Agmatinase.
  
 0.945
AZIN2
Antizyme inhibitor 2.
    
 0.930
ENSCAPP00000004078
annotation not available
  
 0.928
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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